STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPOLGpoly(A) polymerase gamma. (889 aa)    
Predicted Functional Partners:
fip1l1
Factor interacting with PAPOLA and CPSF1.
   
 0.974
sympk
Symplekin.
   
 0.974
cpsf2
Cleavage and polyadenylation specific factor 2.
   
 0.974
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.974
cpsf4
Cleavage and polyadenylation specific factor 4.
    
 0.974
ENSSFAP00005036778
WD repeat domain 33.
   
 0.974
ENSSFAP00005051309
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.955
cstf3
Cleavage stimulation factor subunit 3.
    
 0.941
pcf11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.909
LOC115385402
Cleavage and polyadenylation specificity factor subunit 3-like.
   
 0.899
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.