STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
colec10Collectin subfamily member 10. (281 aa)    
Predicted Functional Partners:
COLEC12
Collectin subfamily member 12.
  
 
 
0.873
ENSSFAP00005033928
annotation not available
    
  0.858
LOC115392027
Pulmonary surfactant-associated protein D-like.
  
 
0.785
LOC115396976
Complement C1r-B subcomponent-like.
    
 0.742
LOC115396979
Calcium-dependent serine proteinase-like.
    
 0.742
ENSSFAP00005024929
Mannan-binding lectin serine peptidase 1.
    
 0.742
C1QC
Complement C1q subcomponent subunit C-like.
  
 
  0.654
LOC115405510
Collectin-12-like.
  
  
 
0.609
tyrobp
TYRO protein tyrosine kinase binding protein.
    
  0.583
C1QB-2
Complement C1q B chain.
  
 
  0.578
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.