STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005007757Lysine (K)-specific demethylase 4A, genome duplicate a. (935 aa)    
Predicted Functional Partners:
kdm1a
Lysine demethylase 1A.
   
 0.618
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.609
znf217
Zinc finger protein 217.
    
  0.596
ENSSFAP00005024529
annotation not available
    
 0.579
stk38l
Serine/threonine kinase 38 like.
    
 0.575
stk38
Serine/threonine kinase 38.
    
 0.575
ENSSFAP00005024938
ATM serine/threonine kinase.
     
 0.570
rnf8
Ring finger protein 8.
    
 0.570
LOC115382757
Histone H3.3-like.
    
 0.569
ENSSFAP00005003432
annotation not available
    
 0.569
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.