STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115397691Low-density lipoprotein receptor-related protein 1B-like. (1263 aa)    
Predicted Functional Partners:
LOC115398990
Dickkopf-related protein 1-like.
    
 0.833
ENSSFAP00005000788
Macrophage stimulating 1 receptor b.
    
  0.815
LOC115388987
Macrophage-stimulating protein receptor-like.
    
  0.815
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.815
agrn
Agrin.
    
 0.810
ENSSFAP00005006470
Low density lipoprotein receptor adaptor protein 1b.
    
 0.800
ENSSFAP00005004619
annotation not available
    
 0.795
dab2
DAB adaptor protein 2.
    
 0.771
pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 0.749
LOC115398580
Growth arrest-specific protein 1-like.
     
 0.741
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.