STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005009049Transmembrane protein 259. (308 aa)    
Predicted Functional Partners:
cachd1
Cache domain containing 1.
      
 0.566
ENSSFAP00005005675
Sphingomyelin phosphodiesterase acid like 3B.
      
 0.558
tmub2
Transmembrane and ubiquitin like domain containing 2.
    
 
 0.558
emc1
ER membrane protein complex subunit 1.
      
 0.552
rnf185
Ring finger protein 185.
    
 
 0.546
stt3a
STT3 oligosaccharyltransferase complex catalytic subunit A.
      
 0.546
RNF5
Ring finger protein 5.
    
 
 0.546
ggcx
Gamma-glutamyl carboxylase.
      
 0.546
c6h6orf120
Chromosome 6 C6orf120 homolog.
      
 0.542
tmem186
Transmembrane protein 186.
      
 0.535
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.