STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APTXAprataxin-like. (332 aa)    
Predicted Functional Partners:
ENSSFAP00005004994
annotation not available
    
 
 0.776
LOC115397323
DNA repair protein XRCC1-like.
    
 
 0.702
ENSSFAP00005006259
X-ray repair complementing defective repair in Chinese hamster cells 1.
    
 
 0.702
tdp1
tyrosyl-DNA phosphodiesterase 1.
    
 
 0.700
rae1
Ribonucleic acid export 1.
   
    0.691
eif2b1
Eukaryotic translation initiation factor 2B subunit alpha.
   
    0.679
lig4
DNA ligase 4.
   
 
 0.660
ENSSFAP00005037569
Poly (ADP-ribose) polymerase 2.
   
 
 0.644
parp1
poly(ADP-ribose) polymerase 1.
   
 
 0.604
ENSSFAP00005027275
Ligase III, DNA, ATP-dependent.
   
 
 0.595
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.