STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c10h17orf49Chromosome 10 C17orf49 homolog. (217 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor.
    
 0.973
ENSSFAP00005037517
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.968
LOC115390127
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5.
    
  0.957
chd8
Chromodomain helicase DNA binding protein 8.
    
  0.935
LOC115387714
HMG box-containing protein 4-like.
    
 0.931
LOC115385351
HMG box-containing protein 4-like.
    
 0.931
wdr5
WD repeat domain 5.
    
 0.929
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
     
 0.928
LOC115401467
Protein max.
   
  0.924
MAX
Protein max-like.
   
  0.924
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.