STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap52Cilia and flagella associated protein 52. (619 aa)    
Predicted Functional Partners:
efhc1
EF-hand domain containing 1.
  
 
 0.940
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.936
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.934
ENSSFAP00005000417
Tektin 3.
   
 
 0.915
ENSSFAP00005048579
PARK2 co-regulated.
   
 
 0.907
ENSSFAP00005051387
annotation not available
   
   0.898
ENSSFAP00005001393
annotation not available
   
   0.895
tekt2
Tektin 2.
   
   0.895
ENSSFAP00005048552
Coiled-coil domain containing 173.
   
  0.893
ENSSFAP00005000213
CXXC finger protein 1b.
   
 0.891
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.