STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf139Ring finger protein 139. (702 aa)    
Predicted Functional Partners:
derl1
Derlin 1.
    
 0.981
hm13
Histocompatibility minor 13.
    
 0.980
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 0.975
selenos
Selenoprotein S.
    
 0.939
ube2g2
Ubiquitin conjugating enzyme E2 G2.
    
 0.938
derl2
Derlin 2.
    
 0.910
LOC115401107
Protein sel-1 homolog 3-like.
    
 0.909
ENSSFAP00005034220
annotation not available
    
 0.909
ENSSFAP00005031801
Zgc:136908.
    
 0.907
LOC115385469
Transitional endoplasmic reticulum ATPase-like.
    
 0.907
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.