STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115396185Methyltransferase-like protein 27. (233 aa)    
Predicted Functional Partners:
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.979
ltv1
LTV1 ribosome biogenesis factor.
   
 0.956
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.956
rps2
Ribosomal protein S2.
    
 0.951
bysl
Bystin like.
   
 0.951
nob1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.933
ENSSFAP00005015671
TSR1 ribosome maturation factor.
   
 0.927
tsr1
pre-rRNA-processing protein TSR1 homolog.
   
 0.927
ENSSFAP00005012111
Ribosomal protein S23.
  
  0.911
mettl1
Methyltransferase like 1.
   
 0.885
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.