RDX protein (Salarias fasciatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RDX

Radixin. (598 aa)

Predicted Functional Partners:

ENSSFAP00005000359

0.924

LOC115393431

0.924

LOC115396512

0.849

LOC115409672

0.849

LOC115404535

0.827

LOC115399569

0.804

ENSSFAP00005046572

0.804

sav1

0.803

LOC115398691

0.778

actb

0.778

Your Current Organism:

Salarias fasciatus

NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFAP00005000359	LOC115393431	ENSSFAP00005000359	ENSSFAP00005016669	SLC9A3 regulator 1b.	Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.	0.834
ENSSFAP00005000359	RDX	ENSSFAP00005000359	ENSSFAP00005011721	SLC9A3 regulator 1b.	Radixin.	0.924
ENSSFAP00005046572	LOC115398691	ENSSFAP00005046572	ENSSFAP00005030685	annotation not available	Actin, non-muscle 6.2.	0.456
ENSSFAP00005046572	RDX	ENSSFAP00005046572	ENSSFAP00005011721	annotation not available	Radixin.	0.804
ENSSFAP00005046572	actb	ENSSFAP00005046572	ENSSFAP00005032145	annotation not available	Actin beta.	0.456
LOC115393431	ENSSFAP00005000359	ENSSFAP00005016669	ENSSFAP00005000359	Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.	SLC9A3 regulator 1b.	0.834
LOC115393431	RDX	ENSSFAP00005016669	ENSSFAP00005011721	Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like.	Radixin.	0.924
LOC115396512	LOC115409672	ENSSFAP00005031423	ENSSFAP00005044621	Sodium/hydrogen exchanger 1-like.	Na(+)/H(+) exchanger beta-like.	0.832
LOC115396512	RDX	ENSSFAP00005031423	ENSSFAP00005011721	Sodium/hydrogen exchanger 1-like.	Radixin.	0.849
LOC115398691	ENSSFAP00005046572	ENSSFAP00005030685	ENSSFAP00005046572	Actin, non-muscle 6.2.	annotation not available	0.456
LOC115398691	LOC115399569	ENSSFAP00005030685	ENSSFAP00005020111	Actin, non-muscle 6.2.	Protein kinase C epsilon type-like.	0.456
LOC115398691	RDX	ENSSFAP00005030685	ENSSFAP00005011721	Actin, non-muscle 6.2.	Radixin.	0.778
LOC115399569	LOC115398691	ENSSFAP00005020111	ENSSFAP00005030685	Protein kinase C epsilon type-like.	Actin, non-muscle 6.2.	0.456
LOC115399569	RDX	ENSSFAP00005020111	ENSSFAP00005011721	Protein kinase C epsilon type-like.	Radixin.	0.804
LOC115399569	actb	ENSSFAP00005020111	ENSSFAP00005032145	Protein kinase C epsilon type-like.	Actin beta.	0.456
LOC115404535	LOC115409672	ENSSFAP00005031568	ENSSFAP00005044621	Sodium/hydrogen exchanger 2-like.	Na(+)/H(+) exchanger beta-like.	0.833
LOC115404535	RDX	ENSSFAP00005031568	ENSSFAP00005011721	Sodium/hydrogen exchanger 2-like.	Radixin.	0.827
LOC115409672	LOC115396512	ENSSFAP00005044621	ENSSFAP00005031423	Na(+)/H(+) exchanger beta-like.	Sodium/hydrogen exchanger 1-like.	0.832
LOC115409672	LOC115404535	ENSSFAP00005044621	ENSSFAP00005031568	Na(+)/H(+) exchanger beta-like.	Sodium/hydrogen exchanger 2-like.	0.833
LOC115409672	RDX	ENSSFAP00005044621	ENSSFAP00005011721	Na(+)/H(+) exchanger beta-like.	Radixin.	0.849