STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex11bPeroxisomal biogenesis factor 11 beta. (261 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
   
 0.987
ENSSFAP00005039283
Peroxisomal biogenesis factor 14.
    
 0.951
pex10
Peroxisomal biogenesis factor 10.
    
 0.951
pex12
Peroxisomal biogenesis factor 12.
   
 0.933
PEX13
Peroxisomal membrane protein PEX13-like.
   
 0.919
LOC115399388
Peroxisomal membrane protein PEX13-like.
   
 0.919
ENSSFAP00005056567
Peroxisomal biogenesis factor 11 gamma.
    
 0.915
pex3
Peroxisomal biogenesis factor 3.
   
 0.890
pex2
Peroxisomal biogenesis factor 2.
   
 0.873
fam185a
Family with sequence similarity 185 member A.
    
 0.870
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.