STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115403945Endoplasmic reticulum-Golgi intermediate compartment protein 2-like. (380 aa)    
Predicted Functional Partners:
ergic3
ERGIC and golgi 3.
   
0.994
ENSSFAP00005002707
GTP binding protein 3, mitochondrial.
  
 0.964
ENSSFAP00005055851
GTP binding protein 3, mitochondrial.
  
 0.964
derl2
Derlin 2.
   
 
 0.926
ENSSFAP00005041221
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 0.835
ENSSFAP00005046619
annotation not available
  
 0.835
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
  
 
 0.828
LOC115401107
Protein sel-1 homolog 3-like.
  
 
 0.827
ENSSFAP00005034220
annotation not available
  
 
 0.827
rpl9
Ribosomal protein L9.
  
 
 0.735
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.