STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt7Nudix hydrolase 7. (216 aa)    
Predicted Functional Partners:
ENSSFAP00005020258
Peptidase (mitochondrial processing) alpha.
   
   0.873
ENSSFAP00005021425
annotation not available
  
 0.872
dcp1a
Decapping mRNA 1A.
    
 0.866
ENSSFAP00005022907
Decapping mRNA 1B.
    
 0.866
LOC115385724
Peroxisomal NADH pyrophosphatase NUDT12-like.
   
 0.863
LOC115398668
Peroxisomal NADH pyrophosphatase NUDT12-like.
   
 0.863
edc4
Enhancer of mRNA decapping 4.
    
 0.856
ENSSFAP00005016643
5'-3' exoribonuclease 1.
   
 0.853
ENSSFAP00005030769
annotation not available
    
 0.850
ENSSFAP00005046985
Transient receptor potential cation channel, subfamily M, member 2.
    
 0.850
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.