STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nkx2-5NK2 homeobox 5. (338 aa)    
Predicted Functional Partners:
ENSSFAP00005032358
annotation not available
    
 
 0.950
ENSSFAP00005004630
Myocyte enhancer factor 2cb.
    
 
 0.925
mef2a
Myocyte enhancer factor 2A.
    
 
 0.917
gata4
GATA binding protein 4.
   
 0.915
ENSSFAP00005023077
GATA binding protein 6.
   
 0.908
ENSSFAP00005039539
GATA binding protein 5.
   
 0.905
LOC115383067
T-box transcription factor TBX5-A-like.
   
 
 0.904
tbx4
T-box transcription factor 4.
   
 
 0.861
tbx5
T-box transcription factor 5.
   
 
 0.861
LOC115388954
GATA-binding factor 1-B-like.
   
 0.852
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.