STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apex1Apurinic/apyrimidinic endodeoxyribonuclease 1. (318 aa)    
Predicted Functional Partners:
LOC115392913
Probable endonuclease 4.
   
 0.989
ENSSFAP00005000474
Nth-like DNA glycosylase 1.
 
 0.944
ENSSFAP00005026173
Nth-like DNA glycosylase 1.
 
 0.943
ENSSFAP00005037541
annotation not available
   
 0.935
ENSSFAP00005037550
annotation not available
   
 0.935
pcna
Proliferating cell nuclear antigen.
  
 0.928
polb
DNA polymerase beta.
    
 0.919
ENSSFAP00005047717
Flap structure-specific endonuclease 1.
  
 0.918
ENSSFAP00005051748
Zgc:110269.
  
 0.918
lig1
DNA ligase 1.
  
 
 0.915
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.