STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lyarLy1 antibody reactive. (348 aa)    
Predicted Functional Partners:
RRP1
Ribosomal RNA processing 1.
   
 
 0.959
ENSSFAP00005001449
Ribosome production factor 2 homolog.
   
   0.955
nhp2
NHP2 ribonucleoprotein.
   
   0.954
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.947
ENSSFAP00005046617
Ribosome biogenesis regulator 1 homolog.
   
 
 0.944
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.937
ddx18
DEAD-box helicase 18.
   
 
 0.935
ENSSFAP00005041580
Ribosomal protein S15.
    
   0.920
nip7
Nucleolar pre-rRNA processing protein NIP7.
   
 
 0.918
ENSSFAP00005009427
Ribosomal RNA processing 15 homolog.
   
   0.914
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.