STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d5TBC1 domain family member 5. (888 aa)    
Predicted Functional Partners:
ENSSFAP00005027277
VPS29 retromer complex component.
    
 0.997
vps26a
VPS26, retromer complex component A.
   
 0.994
ENSSFAP00005040127
VPS35 retromer complex component.
   
 0.993
ENSSFAP00005002741
Ankyrin repeat and FYVE domain containing 1.
   
 0.945
LOC115395987
Vacuolar protein sorting-associated protein 26B-like.
   
 0.926
vps26b
VPS26, retromer complex component B.
   
 0.926
ENSSFAP00005053472
annotation not available
   
 0.926
snx6
Sorting nexin 6.
    
 0.845
snx5
Sorting nexin 5.
    
 0.845
SNX27
Sorting nexin 27.
    
 0.809
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.