STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005015909annotation not available (522 aa)    
Predicted Functional Partners:
ENSSFAP00005000974
Stem-loop binding protein 2.
   
 0.897
ENSSFAP00005023607
annotation not available
   
 0.897
lsm11
LSM11, U7 small nuclear RNA associated.
     
 0.749
exosc5
Exosome component 5.
   
 0.699
dicer1
Dicer 1, ribonuclease III.
    
 
 0.695
RPL38
Ribosomal protein L38.
     
 0.676
exosc6
Exosome component 6.
   
 0.664
exosc4
Exosome component 4.
   
 0.664
rpl30
Ribosomal protein L30.
     
 0.660
rpl4
Ribosomal protein L4.
    
 0.657
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.