STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIXDC1DIX domain containing 1. (566 aa)    
Predicted Functional Partners:
ENSSFAP00005018647
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.930
ENSSFAP00005000747
Cyclin-dependent kinase 12.
    
 0.791
cdk13
Cyclin dependent kinase 13.
    
 0.791
ENSSFAP00005003846
Cyclin T2b.
   
 0.641
ENSSFAP00005012681
Cyclin T2a.
   
 0.641
ENSSFAP00005034415
annotation not available
   
 0.641
ccnq
Cyclin Q.
   
 0.641
ccnk
Cyclin K.
   
 0.641
ssrp1
Structure specific recognition protein 1.
   
 0.614
supt5h
SPT5 homolog, DSIF elongation factor subunit.
     
 0.613
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.