STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppargc1bPPARG coactivator 1 beta. (963 aa)    
Predicted Functional Partners:
med19
Mediator complex subunit 19.
     
 0.926
med27
Mediator complex subunit 27.
     
 0.922
NCBP1
Nuclear cap binding protein subunit 1.
    
   0.898
srebf1
Sterol regulatory element binding transcription factor 1.
    
 0.888
srebf2
Sterol regulatory element binding transcription factor 2.
    
 0.888
LOC115395329
Steroid hormone receptor ERR1-like.
    
 0.884
med23
Mediator complex subunit 23.
     
 0.874
ENSSFAP00005000284
Mediator complex subunit 15.
     
 0.871
ENSSFAP00005000294
annotation not available
     
 0.871
LOC115402013
N-myc proto-oncogene protein-like.
    
 0.865
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.