STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005016605Excision repair cross-complementation group 6-like 2. (1392 aa)    
Predicted Functional Partners:
ENSSFAP00005018647
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.944
ruvbl1
RuvB like AAA ATPase 1.
    
 0.914
ruvbl2
RuvB like AAA ATPase 2.
   
 0.914
ENSSFAP00005056208
DNA methyltransferase 1 associated protein 1.
    
 0.914
actl6a
Actin like 6A.
   
 0.913
pcna
Proliferating cell nuclear antigen.
  
 0.900
ENSSFAP00005019387
annotation not available
   
 0.898
actr5
Actin related protein 5.
    
 0.893
ENSSFAP00005027740
annotation not available
  
 0.892
rad18
RAD18 E3 ubiquitin protein ligase.
   
 0.878
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.