STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005017377T-box transcription factor Ta. (418 aa)    
Predicted Functional Partners:
LOC115385221
Homeobox protein not2-like.
    
 0.794
LOC115383438
POU domain, class 5, transcription factor 1-like.
   
 0.706
gata4
GATA binding protein 4.
   
 0.697
ENSSFAP00005023077
GATA binding protein 6.
   
 0.664
LOC115409686
Eomesodermin-like.
  
 
0.660
foxh1
Forkhead box H1.
   
 
 0.660
ENSSFAP00005031207
Mix paired-like homeobox.
   
 
 0.655
snai2
Snail family transcriptional repressor 2.
    
 0.645
GATA2
GATA binding protein 2.
   
 0.641
ENSSFAP00005015110
GATA binding protein 3.
   
 0.641
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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