STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005017517Mannosidase, alpha, class 1B, member 1b. (402 aa)    
Predicted Functional Partners:
ganab
Glucosidase II alpha subunit.
   
 
 0.885
man1c1
Mannosidase alpha class 1C member 1.
  
 
0.874
ENSSFAP00005006850
Mannosidase, alpha, class 1A, member 1.
  
 
0.856
man1a2
Mannosidase alpha class 1A member 2.
  
 
0.855
LOC115382804
Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like.
  
  
 
0.829
LOC115397353
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like.
     
 0.758
ENSSFAP00005024793
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase b.
     
 0.758
pgm3
Phosphoglucomutase 3.
     
 0.737
ENSSFAP00005015879
Phosphoglucomutase 2-like 1.
     
 0.593
pgm2
Phosphoglucomutase 2.
     
 0.593
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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