STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr45bWD repeat domain 45B. (344 aa)    
Predicted Functional Partners:
ENSSFAP00005016426
Autophagy related 2A.
    
 
 0.825
tecpr2
Tectonin beta-propeller repeat containing 2.
   
  
 0.604
becn1
Beclin 1.
    
 
 0.597
coasy
Coenzyme A synthase.
      
 0.583
ENSSFAP00005005510
annotation not available
   
 0.571
ENSSFAP00005020504
WD repeat domain, phosphoinositide interacting 1.
   
0.571
ENSSFAP00005037321
WD repeat domain, phosphoinositide interacting 2.
   
0.571
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
0.571
LOC115387072
Ras-related protein Rab-40C.
 
 
  
 0.537
ENSSFAP00005009828
ATG7 autophagy related 7 homolog (S. cerevisiae).
    
 
 0.526
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.