STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115391354Oxysterol-binding protein-related protein 5-like. (868 aa)    
Predicted Functional Partners:
npc1
NPC intracellular cholesterol transporter 1.
   
 0.874
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.870
LOC115403593
Golgi pH regulator.
 
      0.811
gale
UDP-galactose-4-epimerase.
     
 0.775
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.744
ENSSFAP00005047254
Katanin p60 subunit A-like 2.
   
 
 0.648
scap
SREBF chaperone.
   
 0.627
arl15
ADP ribosylation factor like GTPase 15.
   
 0.574
rhoq
Ras homolog family member Q.
    
  0.573
ENSSFAP00005052590
Ras homolog family member H.
    
  0.573
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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