STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fopnlFGFR1OP N-terminal like. (135 aa)    
Predicted Functional Partners:
LOC115385415
pre-mRNA-splicing factor ISY1 homolog.
    
   0.962
gsc
Goosecoid homeobox.
    
   0.962
catip
Ciliogenesis associated TTC17 interacting protein.
   
    0.740
ENSSFAP00005031162
Acid phosphatase 1.
   
    0.720
ENSSFAP00005056411
OFD1 centriole and centriolar satellite protein.
   
 
 0.704
aktip
AKT interacting protein.
   
    0.682
ENSSFAP00005024642
annotation not available
    
 
 0.662
pcm1
Pericentriolar material 1.
    
 
 0.658
pibf1
Progesterone immunomodulatory binding factor 1.
   
 
 0.636
bmerb1
bMERB domain containing 1.
      
 0.557
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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