STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc34Coiled-coil domain containing 34. (326 aa)    
Predicted Functional Partners:
ENSSFAP00005011363
Rhomboid, veinlet-like 3 (Drosophila).
    
  0.642
ENSSFAP00005022357
Glutathione S-transferase, C-terminal domain containing.
    
 
 0.615
ENSSFAP00005019921
RIB43A domain with coiled-coils 2.
   
 0.611
ENSSFAP00005030489
annotation not available
   
 0.611
ENSSFAP00005040420
RIB43A domain with coiled-coils 1.
   
 0.611
wdr18
WD repeat domain 18.
   
 0.594
ENSSFAP00005003301
annotation not available
   
 0.584
ripk4
Receptor interacting serine/threonine kinase 4.
   
 0.584
LOC115385878
Receptor-interacting serine/threonine-protein kinase 4-like.
   
 0.584
tex10
Testis expressed 10.
    
 0.581
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.