STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005019888RAB3A interacting protein (rabin3)-like 1. (364 aa)    
Predicted Functional Partners:
exoc6
Exocyst complex component 6.
    
 0.906
exoc6b
Exocyst complex component 6B.
    
 0.906
LOC115397128
Ras-related protein Rab-11A-like.
    
 0.900
LOC115381493
Ras-related protein Rab-11B-like.
    
 0.900
LOC115381494
Ras-related protein Rab-11B-like.
    
 0.900
LOC115406165
Ras-related protein Rab-11B.
    
 0.900
ENSSFAP00005055565
annotation not available
    
 0.900
exoc5
Exocyst complex component 5.
    
 0.882
LOC115409956
Ras-related protein Rab-25-like.
    
 0.875
ENSSFAP00005019042
RAB, member of RAS oncogene family-like 2.
    
 0.875
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.