STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
supt6hSPT6 homolog, histone chaperone and transcription elongation factor. (1741 aa)    
Predicted Functional Partners:
ENSSFAP00005018647
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
supt5h
SPT5 homolog, DSIF elongation factor subunit.
   
 0.999
ENSSFAP00005006766
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.998
supt4h1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.998
cdc73
Cell division cycle 73.
   
 0.998
ssrp1
Structure specific recognition protein 1.
   
 0.998
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.996
ENSSFAP00005040394
CTR9 homolog, Paf1/RNA polymerase II complex component.
  
 0.991
ENSSFAP00005040395
annotation not available
  
 0.991
LOC115400102
Protein IWS1 homolog.
   
 0.989
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.