STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005019918SMAD specific E3 ubiquitin protein ligase 2. (772 aa)    
Predicted Functional Partners:
smad7
SMAD family member 7.
    
 0.972
smad6
SMAD family member 6.
    
 0.970
rps27a
Ribosomal protein S27a.
    
 0.947
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.942
LOC115394437
TGF-beta receptor type-1-like.
    
 0.905
ptch1
Patched 1.
    
 0.898
ENSSFAP00005046623
Patched 2.
    
 0.898
traf6
TNF receptor associated factor 6.
    
 0.897
TGFBR2
TGF-beta receptor type-2-like.
    
 0.889
TGFBR2-2
TGF-beta receptor type-2-like.
    
 0.889
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.