STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005021172Carbonic anhydrase Xa. (339 aa)    
Predicted Functional Partners:
ENSSFAP00005001449
Ribosome production factor 2 homolog.
   
 
 0.722
ENSSFAP00005046617
Ribosome biogenesis regulator 1 homolog.
   
 
 0.647
utp18
UTP18 small subunit processome component.
   
  
 0.612
rpl11
Ribosomal protein L11.
    
 
 0.572
rpl5
Ribosomal protein L5.
    
 
 0.561
RPL5
60S ribosomal protein L5-like.
    
 
 0.561
grwd1
Glutamate rich WD repeat containing 1.
   
  
 0.550
ENSSFAP00005041794
Cell division cycle and apoptosis regulator 1.
      
 0.536
wdr43
WD repeat domain 43.
   
    0.508
gtpbp4
GTP binding protein 4.
   
  
 0.504
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.