STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAVIN1Caveolae-associated protein 1-like. (460 aa)    
Predicted Functional Partners:
ENSSFAP00005032621
Caveolin 3.
   
 0.777
cav1
Caveolin 1.
   
 0.777
LOC115388078
Caveolin-2-like.
   
 0.773
cav2
Caveolin 2.
   
 0.746
ENSSFAP00005041694
annotation not available
    
 0.690
ENSSFAP00005035972
Zgc:158296.
   
 0.665
LOC115388908
Caveolin-2-like.
   
 0.665
dmtf1
Cyclin D binding myb like transcription factor 1.
    
 0.646
ENSSFAP00005007578
Anillin, actin binding protein.
    
  0.631
ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit.
     
 0.613
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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