STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vegfaVascular endothelial growth factor A. (213 aa)    
Predicted Functional Partners:
ENSSFAP00005047575
Platelet-derived growth factor receptor, beta polypeptide.
    
 0.921
ENSSFAP00005047762
annotation not available
    
 0.921
ENSSFAP00005023653
Heparan sulfate proteoglycan 2.
     
 0.917
LOC115399700
Vascular endothelial growth factor receptor kdr-like.
    
 0.913
kdr
Kinase insert domain receptor.
    
 0.913
ENSSFAP00005045696
Fms-related tyrosine kinase 4.
    
 0.913
tie1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
    
 0.911
pdgfra
Platelet derived growth factor receptor alpha.
    
 0.910
ENSSFAP00005049051
Fms-related tyrosine kinase 3.
    
 0.910
mmp9
Matrix metallopeptidase 9.
     
 0.902
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.