STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005022725Transmembrane anterior posterior transformation 1b. (548 aa)    
Predicted Functional Partners:
suco
SUN domain containing ossification factor.
    
   0.774
cstf1
Cleavage stimulation factor subunit 1.
 
      0.665
tra2a
Transformer 2 alpha homolog.
   
 
  0.526
LOC115406417
Transformer-2 protein homolog alpha-like.
   
 
  0.526
LOC115402644
Transformer-2 protein homolog beta-like.
   
 
  0.526
ZFYVE1
Zinc finger FYVE domain-containing protein 1-like.
   
    0.512
LOC115401047
Zinc finger FYVE domain-containing protein 1-like.
   
    0.512
LOC115401745
Zinc finger FYVE domain-containing protein 1-like.
   
    0.512
LOC115392402
Leptin-like.
      
 0.454
ENSSFAP00005051309
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
   
 
  0.423
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.