STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005023285Thyroid hormone receptor alpha b. (410 aa)    
Predicted Functional Partners:
HDAC3
Histone deacetylase 3.
    
 0.880
ENSSFAP00005016868
Nuclear receptor corepressor 1.
    
 0.880
ENSSFAP00005054000
Nuclear receptor corepressor 2.
    
 0.880
med24
Mediator complex subunit 24.
    
  0.878
ENSSFAP00005027202
E1A binding protein p300 b.
    
 0.878
med17
Mediator complex subunit 17.
    
  0.867
ENSSFAP00005003031
annotation not available
    
0.866
LOC115397474
Retinoic acid receptor RXR-beta-A-like.
    
0.866
LOC115381390
Retinoic acid receptor RXR-gamma-B-like.
    
0.866
ENSSFAP00005049328
Retinoid X receptor, alpha a.
    
0.866
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.