STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005023307Glypican 6a. (537 aa)    
Predicted Functional Partners:
fzd4
Frizzled class receptor 4.
    
 0.814
LOC115389314
Syndecan-4-like.
    
 0.811
LOC115406037
Proheparin-binding EGF-like growth factor.
    
 0.773
LOC115397209
Syndecan-2-like.
    
 0.709
LOC115409526
syndecan-2-A-like.
     
 0.683
ext2
Exostosin glycosyltransferase 2.
     
 0.673
LOC115403569
Indian hedgehog B protein-like.
    
 0.670
dhh
Desert hedgehog signaling molecule.
    
 0.670
ihh
Indian hedgehog signaling molecule.
    
 0.670
shh
Sonic hedgehog signaling molecule.
    
 0.670
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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