STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115404251Beta-2-microglobulin-like. (117 aa)    
Predicted Functional Partners:
ENSSFAP00005027740
annotation not available
   
 0.974
rpa3
Replication protein A3.
   
 0.954
ENSSFAP00005005676
annotation not available
   
 0.948
RPA1
Replication protein A 70 kDa DNA-binding subunit-like.
   
 0.919
rpa1
Replication protein A1.
   
 0.919
pcna
Proliferating cell nuclear antigen.
   
 0.918
ENSSFAP00005035485
BLM RecQ like helicase.
   
 0.912
ENSSFAP00005003968
annotation not available
    
 0.911
top3a
DNA topoisomerase III alpha.
    
 0.903
ENSSFAP00005046334
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
    
 0.902
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.