LOC115386976 protein (Salarias fasciatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC115386976

Myoblast determination protein 1 homolog. (267 aa)

Predicted Functional Partners:

tbpl1

0.824

TCF4

0.776

LOC115404822

0.776

tcf12

0.776

LOC115381266

0.776

TCF12

0.774

tbp

0.720

ENSSFAP00005036123

0.720

ENSSFAP00005032358

0.710

ENSSFAP00005027202

0.687

Your Current Organism:

Salarias fasciatus

NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSFAP00005027202	ENSSFAP00005032358	ENSSFAP00005027202	ENSSFAP00005032358	E1A binding protein p300 b.	annotation not available	0.562
ENSSFAP00005027202	ENSSFAP00005036123	ENSSFAP00005027202	ENSSFAP00005036123	E1A binding protein p300 b.	TATA box binding protein like 2.	0.756
ENSSFAP00005027202	LOC115381266	ENSSFAP00005027202	ENSSFAP00005046141	E1A binding protein p300 b.	Transcription factor E2-alpha-like.	0.716
ENSSFAP00005027202	LOC115386976	ENSSFAP00005027202	ENSSFAP00005024434	E1A binding protein p300 b.	Myoblast determination protein 1 homolog.	0.687
ENSSFAP00005027202	LOC115404822	ENSSFAP00005027202	ENSSFAP00005032504	E1A binding protein p300 b.	Transcription factor E2-alpha-like.	0.716
ENSSFAP00005027202	TCF12	ENSSFAP00005027202	ENSSFAP00005038410	E1A binding protein p300 b.	Transcription factor 12.	0.622
ENSSFAP00005027202	TCF4	ENSSFAP00005027202	ENSSFAP00005021516	E1A binding protein p300 b.	Transcription factor 4.	0.716
ENSSFAP00005027202	tbp	ENSSFAP00005027202	ENSSFAP00005018850	E1A binding protein p300 b.	TATA-box binding protein.	0.756
ENSSFAP00005027202	tbpl1	ENSSFAP00005027202	ENSSFAP00005007152	E1A binding protein p300 b.	TATA-box binding protein like 1.	0.564
ENSSFAP00005027202	tcf12	ENSSFAP00005027202	ENSSFAP00005043612	E1A binding protein p300 b.	Transcription factor 12.	0.716
ENSSFAP00005032358	ENSSFAP00005027202	ENSSFAP00005032358	ENSSFAP00005027202	annotation not available	E1A binding protein p300 b.	0.562
ENSSFAP00005032358	LOC115381266	ENSSFAP00005032358	ENSSFAP00005046141	annotation not available	Transcription factor E2-alpha-like.	0.592
ENSSFAP00005032358	LOC115386976	ENSSFAP00005032358	ENSSFAP00005024434	annotation not available	Myoblast determination protein 1 homolog.	0.710
ENSSFAP00005032358	LOC115404822	ENSSFAP00005032358	ENSSFAP00005032504	annotation not available	Transcription factor E2-alpha-like.	0.592
ENSSFAP00005032358	TCF4	ENSSFAP00005032358	ENSSFAP00005021516	annotation not available	Transcription factor 4.	0.592
ENSSFAP00005032358	tcf12	ENSSFAP00005032358	ENSSFAP00005043612	annotation not available	Transcription factor 12.	0.592
ENSSFAP00005036123	ENSSFAP00005027202	ENSSFAP00005036123	ENSSFAP00005027202	TATA box binding protein like 2.	E1A binding protein p300 b.	0.756
ENSSFAP00005036123	LOC115386976	ENSSFAP00005036123	ENSSFAP00005024434	TATA box binding protein like 2.	Myoblast determination protein 1 homolog.	0.720
ENSSFAP00005036123	tbp	ENSSFAP00005036123	ENSSFAP00005018850	TATA box binding protein like 2.	TATA-box binding protein.	0.832
ENSSFAP00005036123	tbpl1	ENSSFAP00005036123	ENSSFAP00005007152	TATA box binding protein like 2.	TATA-box binding protein like 1.	0.894