STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcf3ATP binding cassette subfamily F member 3. (714 aa)    
Predicted Functional Partners:
ENSSFAP00005007869
GCN1 activator of EIF2AK4.
   
 0.992
rpl11
Ribosomal protein L11.
  
 0.986
ENSSFAP00005012111
Ribosomal protein S23.
  
 0.959
mrpl20
Mitochondrial ribosomal protein L20.
  
 
 0.959
mrps12
Mitochondrial ribosomal protein S12.
  
 0.958
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.955
rpl35
Ribosomal protein L35.
  
 
 0.950
rpl23a
Ribosomal protein L23a.
  
 
 0.949
ENSSFAP00005006883
Ribosomal protein S18.
  
 
 0.948
rpl9
Ribosomal protein L9.
  
 
 0.946
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.