STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mthfrMethylenetetrahydrofolate reductase. (739 aa)    
Predicted Functional Partners:
cth
Cystathionine gamma-lyase.
  
 0.995
mtr
5-methyltetrahydrofolate-homocysteine methyltransferase.
  
 
 0.965
LOC115382639
S-adenosylmethionine synthase-like.
  
 
 0.951
ENSSFAP00005041826
Methionine adenosyltransferase I, alpha.
  
 
 0.951
ENSSFAP00005049288
annotation not available
  
 
 0.951
LOC115383121
S-adenosylmethionine synthase-like.
  
 
 0.951
LOC115398177
S-adenosylmethionine synthase.
  
 
 0.951
gart
annotation not available
  
 
 0.946
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.940
shmt2
Serine hydroxymethyltransferase 2.
  
 
 0.939
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.