STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005026941Kelch domain containing 8B. (350 aa)    
Predicted Functional Partners:
CUL3
Cullin-3-like.
    
 0.590
cacul1
CDK2 associated cullin domain 1.
    
 0.590
LOC115400806
Cullin-3.
    
 0.590
ENSSFAP00005029424
Cullin 1a.
    
 0.590
pex7
Peroxisomal biogenesis factor 7.
    
   0.532
nae1
NEDD8 activating enzyme E1 subunit 1.
     
 0.501
ube2f
Ubiquitin conjugating enzyme E2 F (putative).
    
  0.484
kbtbd12
Kelch repeat and BTB domain containing 12.
    
0.484
ube2m
Ubiquitin conjugating enzyme E2 M.
    
  0.484
ivns1abp
Influenza virus NS1A binding protein.
  
 
 
0.470
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.