STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pclafPCNA clamp associated factor. (119 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen.
   
  0.987
ube2c
Ubiquitin conjugating enzyme E2 C.
   
 
 0.938
ENSSFAP00005027740
annotation not available
    
   0.937
LOC115393538
Baculoviral IAP repeat-containing protein 5.2-A-like.
   
  
 0.920
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
  
 0.918
ENSSFAP00005018330
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.906
cdc20
Cell division cycle 20.
   
 
 0.888
ENSSFAP00005054267
Nucleolar and spindle associated protein 1.
   
  
 0.868
ENSSFAP00005017548
annotation not available
   
  
 0.860
cdca8
Cell division cycle associated 8.
   
  
 0.858
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.