STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nedd1NEDD1 gamma-tubulin ring complex targeting factor. (670 aa)    
Predicted Functional Partners:
LOC115383347
Mitotic-spindle organizing protein 2-like.
    
 0.985
tubgcp5
Tubulin gamma complex associated protein 5.
    
 0.964
ENSSFAP00005000027
Tubulin, gamma complex associated protein 4.
    
 0.960
tubg1
Tubulin gamma 1.
    
 0.954
tubd1
Tubulin delta 1.
    
 0.954
ENSSFAP00005008275
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 0.922
tubgcp3
Tubulin gamma complex associated protein 3.
    
 0.922
tubgcp2
Tubulin gamma complex associated protein 2.
   
 0.896
mzt1
Mitotic spindle organizing protein 1.
   
 0.883
ENSSFAP00005052206
annotation not available
   
 0.878
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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