STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A42Mitochondrial coenzyme A transporter SLC25A42-like. (330 aa)    
Predicted Functional Partners:
tk1
Thymidine kinase 1.
  
 
 0.957
LOC115394313
Thymidylate synthase-like.
  
 0.947
itpa
Inosine triphosphatase.
  
 0.918
ENSSFAP00005021425
annotation not available
  
 0.913
ENSSFAP00005021420
annotation not available
  
 0.896
ENSSFAP00005013504
Centromere protein K.
   
 0.894
LOC115400944
Ribonucleoside-diphosphate reductase large subunit.
  
 
 0.882
LOC115395274
Ribonucleoside-diphosphate reductase large subunit-like.
  
 
 0.882
ENSSFAP00005014671
Centromere protein N.
   
 0.878
rfc3
Replication factor C subunit 3.
   
 
 0.866
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.