STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
miga1Mitoguardin 1. (591 aa)    
Predicted Functional Partners:
nexn
Nexilin F-actin binding protein.
 
   
 0.787
LOC115382654
Mitoguardin 2-like.
  
 
 
0.726
ENSSFAP00005038546
Mitoguardin 2.
  
 
 
0.726
dpm3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
     
 0.668
surf6
Surfeit 6.
     
 0.589
LOC115382659
Surfeit locus protein 6 homolog.
     
 0.589
ENSSFAP00005024551
Magnesium transporter 1.
   
 
  0.553
LOC115389672
Tumor suppressor candidate 3.
   
 
  0.553
ENSSFAP00005021425
annotation not available
      
 0.551
wdr20
WD repeat domain 20.
    
 
 0.510
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.