STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005031766Ubiquitin specific peptidase 45. (774 aa)    
Predicted Functional Partners:
ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit.
    
 0.740
ubb
Ubiquitin B.
    
 0.730
ENSSFAP00005040432
annotation not available
    
 0.730
rps27a
Ribosomal protein S27a.
    
  0.711
mysm1
Myb like, SWIRM and MPN domains 1.
   
  
 0.625
LOC115398486
Ubiquitin-like protein 4A.
    
 0.599
ENSSFAP00005012919
annotation not available
    
 0.553
ENSSFAP00005024524
annotation not available
    
 0.553
zfand4
Zinc finger AN1-type containing 4.
    
 0.545
ENSSFAP00005003705
annotation not available
    
  0.540
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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