STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmgdhDimethylglycine dehydrogenase. (862 aa)    
Predicted Functional Partners:
gcsh
Glycine cleavage system protein H.
  
 0.972
LOC115391601
Glycine cleavage system H protein, mitochondrial-like.
  
 0.972
gart
annotation not available
  
 
 0.960
GLDC
Glycine dehydrogenase (decarboxylating), mitochondrial-like.
  
 0.948
LOC115398033
Glycine dehydrogenase (decarboxylating), mitochondrial-like.
  
 0.948
pipox
Pipecolic acid and sarcosine oxidase.
  
 0.944
ddo
D-aspartate oxidase.
  
 0.911
ENSSFAP00005055464
D-amino-acid oxidase, tandem duplicate 2.
  
 0.911
gnmt
Glycine N-methyltransferase.
   
 
 0.891
SHMT2
Serine hydroxymethyltransferase 2.
  
 0.883
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.