STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115407748Lysine-specific demethylase 5B-B-like. (1542 aa)    
Predicted Functional Partners:
atp5f1c
ATP synthase F1 subunit gamma.
  
 0.978
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.978
atp5f1d
ATP synthase F1 subunit delta.
  
 0.978
ATP5F1A
ATP synthase F1 subunit alpha.
  
 0.949
LOC115398687
ATP synthase subunit alpha, mitochondrial-like.
  
 0.949
ENSSFAP00005004167
ATP synthase peripheral stalk subunit d.
   
 0.926
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.922
atp5mc3
ATP synthase membrane subunit c locus 3.
  
 0.896
LOC115392955
V-type proton ATPase 16 kDa proteolipid subunit.
  
 0.896
LOC115386428
V-type proton ATPase 16 kDa proteolipid subunit-like.
  
 0.896
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.