STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005032172ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae). (656 aa)    
Predicted Functional Partners:
utp3
UTP3 small subunit processome component.
   
 0.998
ddx10
DEAD-box helicase 10.
   
 0.998
utp18
UTP18 small subunit processome component.
   
 0.998
nol6
Nucleolar protein 6.
   
 0.997
utp6
UTP6 small subunit processome component.
   
 0.997
ddx47
DEAD-box helicase 47.
   
 0.995
abt1
Activator of basal transcription 1.
   
 0.995
ENSSFAP00005032103
Nucleolar protein 10.
   
 0.992
ddx18
DEAD-box helicase 18.
   
 0.991
ENSSFAP00005001645
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein).
   
 0.990
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.